- NAME
ISOSTRESS - Run MD simulations at constant pressure with
an isotropic surface variation ( cell parameters) and independent
cell parameter variation. This protocol is engineered for membrane simulations.
- SYNOPSIS
ISOSTRESSXY [PRESS-EXT pext] [BARO-MASS wpr] [COMPR compressibility]
- DESCRIPTION
See command ISOSTRESS.
- EXAMPLES
...
&SETUP
CRYSTAL 40.0 40.0 60.0 90.0 90.0 90.0
&END
...
ISOSTRESSXY PRESS-EXT 0.1 BARO-MASS 10.0 COMPR 5.3e-4
...
The , cell
parameters vary isotropically independent of the cell parameter
under atmospheric pressure.
- DEFAULTS
ORAC uses the water compressibility at 300 K (i.e.
5.3 10 MPa) as the default compressibility.
- WARNINGS
- 1
- ORAC can carry out constant pressure runs with isotropic
surface changes only for orthogonal cells.
- 2
- Make sure that when simulations at constant pressure are run ORAC has
been compiled with the appropriate PRESSURE option in the
config.h file (see Chapter 11)
procacci
2021-12-29