DEF_FRAGMENT

NAME
DEF_FRAGMENT - Define a fragment of a solute.

SYNOPSIS
DEF_FRAGMENT  begin   end

DESCRIPTION
This command is used in conjunction with the command PLOT FRAGMENT in &INOUT, or in conjunction with the command DIST_FRAGMENT in this environment. The arguments indicate the ordinal numbers of the first begin and the last end atom of a solute fragment. This numbers may be deduced by inspection of the PDB file including the hydrogen atoms (see command ASCII for generating a PDB file with hydrogen atoms). The command DEF_FRAGMENT can appear more than one time in the environment. The atoms of different solute molecules defined with this command can overlap.

EXAMPLES
DEF_FRAGMENT 1 80
DEF_FRAGMENT 81 90
DEF_FRAGMENT 1001 1256